Reference documentation for deal.II version 9.4.0
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Public Types | Public Member Functions | Static Public Attributes | Protected Attributes | List of all members
LinearAlgebra::distributed::BlockVector< Number > Class Template Reference

#include <deal.II/lac/la_parallel_block_vector.h>

Inheritance diagram for LinearAlgebra::distributed::BlockVector< Number >:
[legend]

Public Types

using BaseClass = BlockVectorBase< Vector< Number > >
 
using BlockType = typename BaseClass::BlockType
 
using value_type = typename BaseClass::value_type
 
using real_type = typename BaseClass::real_type
 
using pointer = typename BaseClass::pointer
 
using const_pointer = typename BaseClass::const_pointer
 
using reference = typename BaseClass::reference
 
using const_reference = typename BaseClass::const_reference
 
using size_type = typename BaseClass::size_type
 
using iterator = typename BaseClass::iterator
 
using const_iterator = typename BaseClass::const_iterator
 

Public Member Functions

void collect_sizes ()
 
BlockTypeblock (const unsigned int i)
 
const BlockTypeblock (const unsigned int i) const
 
const BlockIndicesget_block_indices () const
 
unsigned int n_blocks () const
 
std::size_t locally_owned_size () const
 
iterator begin ()
 
const_iterator begin () const
 
iterator end ()
 
const_iterator end () const
 
value_type operator() (const size_type i) const
 
reference operator() (const size_type i)
 
value_type operator[] (const size_type i) const
 
reference operator[] (const size_type i)
 
void extract_subvector_to (const std::vector< size_type > &indices, std::vector< OtherNumber > &values) const
 
void extract_subvector_to (ForwardIterator indices_begin, const ForwardIterator indices_end, OutputIterator values_begin) const
 
bool operator== (const BlockVectorBase< VectorType2 > &v) const
 
value_type operator* (const BlockVectorBase &V) const
 
value_type add_and_dot (const value_type a, const BlockVectorBase &V, const BlockVectorBase &W)
 
bool in_local_range (const size_type global_index) const
 
bool is_non_negative () const
 
BlockVectorBaseoperator+= (const BlockVectorBase &V)
 
BlockVectorBaseoperator-= (const BlockVectorBase &V)
 
void add (const std::vector< size_type > &indices, const Vector< Number > &values)
 
void add (const size_type n_elements, const size_type *indices, const Number *values)
 
void add (const value_type s)
 
void add (const value_type a, const BlockVectorBase &V)
 
void add (const value_type a, const BlockVectorBase &V, const value_type b, const BlockVectorBase &W)
 
void sadd (const value_type s, const BlockVectorBase &V)
 
void sadd (const value_type s, const value_type a, const BlockVectorBase &V)
 
void sadd (const value_type s, const value_type a, const BlockVectorBase &V, const value_type b, const BlockVectorBase &W)
 
void sadd (const value_type s, const value_type a, const BlockVectorBase &V, const value_type b, const BlockVectorBase &W, const value_type c, const BlockVectorBase &X)
 
BlockVectorBaseoperator*= (const value_type factor)
 
BlockVectorBaseoperator/= (const value_type factor)
 
void scale (const BlockVector2 &v)
 
void equ (const value_type a, const BlockVector2 &V)
 
virtual void compress (VectorOperation::values)
 
1: Basic operations
 BlockVector (const size_type num_blocks=0, const size_type block_size=0)
 
 BlockVector (const BlockVector< Number > &V)
 
template<typename OtherNumber >
 BlockVector (const BlockVector< OtherNumber > &v)
 
 BlockVector (const std::vector< size_type > &block_sizes)
 
 BlockVector (const std::vector< IndexSet > &local_ranges, const std::vector< IndexSet > &ghost_indices, const MPI_Comm &communicator)
 
 BlockVector (const std::vector< IndexSet > &local_ranges, const MPI_Comm &communicator)
 
virtual ~BlockVector () override=default
 
virtual BlockVectoroperator= (const value_type s) override
 
BlockVectoroperator= (const BlockVector &V)
 
template<class Number2 >
BlockVectoroperator= (const BlockVector< Number2 > &V)
 
BlockVectoroperator= (const Vector< Number > &V)
 
BlockVector< Number > & operator= (const PETScWrappers::MPI::BlockVector &petsc_vec)
 
BlockVector< Number > & operator= (const TrilinosWrappers::MPI::BlockVector &trilinos_vec)
 
void reinit (const size_type num_blocks, const size_type block_size=0, const bool omit_zeroing_entries=false)
 
void reinit (const std::vector< size_type > &block_sizes, const bool omit_zeroing_entries=false)
 
template<typename Number2 >
void reinit (const BlockVector< Number2 > &V, const bool omit_zeroing_entries=false)
 
virtual void compress (::VectorOperation::values operation) override
 
void update_ghost_values () const
 
void zero_out_ghosts () const
 
void zero_out_ghost_values () const
 
bool has_ghost_elements () const
 
void set_ghost_state (const bool ghosted) const
 
template<typename Number2 >
void copy_locally_owned_data_from (const BlockVector< Number2 > &src)
 
template<typename OtherNumber >
void add (const std::vector< size_type > &indices, const ::Vector< OtherNumber > &values)
 
void sadd (const Number s, const BlockVector< Number > &V)
 
virtual bool all_zero () const override
 
virtual Number mean_value () const override
 
real_type lp_norm (const real_type p) const
 
void swap (BlockVector< Number > &v)
 

Static Public Attributes

static constexpr unsigned int communication_block_size = 20
 

Protected Attributes

std::vector< Vector< Number > > components
 
BlockIndices block_indices
 

2: Implementation of VectorSpaceVector

virtual void reinit (const VectorSpaceVector< Number > &V, const bool omit_zeroing_entries=false) override
 
virtual BlockVector< Number > & operator*= (const Number factor) override
 
virtual BlockVector< Number > & operator/= (const Number factor) override
 
virtual BlockVector< Number > & operator+= (const VectorSpaceVector< Number > &V) override
 
virtual BlockVector< Number > & operator-= (const VectorSpaceVector< Number > &V) override
 
virtual void import (const LinearAlgebra::ReadWriteVector< Number > &V, VectorOperation::values operation, std::shared_ptr< const Utilities::MPI::CommunicationPatternBase > communication_pattern={}) override
 
virtual Number operator* (const VectorSpaceVector< Number > &V) const override
 
template<typename FullMatrixType >
void multivector_inner_product (FullMatrixType &matrix, const BlockVector< Number > &V, const bool symmetric=false) const
 
template<typename FullMatrixType >
Number multivector_inner_product_with_metric (const FullMatrixType &matrix, const BlockVector< Number > &V, const bool symmetric=false) const
 
template<typename FullMatrixType >
void mmult (BlockVector< Number > &V, const FullMatrixType &matrix, const Number s=Number(0.), const Number b=Number(1.)) const
 
virtual void add (const Number a) override
 
virtual void add (const Number a, const VectorSpaceVector< Number > &V) override
 
virtual void add (const Number a, const VectorSpaceVector< Number > &V, const Number b, const VectorSpaceVector< Number > &W) override
 
virtual void add (const std::vector< size_type > &indices, const std::vector< Number > &values)
 
virtual void sadd (const Number s, const Number a, const VectorSpaceVector< Number > &V) override
 
virtual void scale (const VectorSpaceVector< Number > &scaling_factors) override
 
virtual void equ (const Number a, const VectorSpaceVector< Number > &V) override
 
virtual real_type l1_norm () const override
 
virtual real_type l2_norm () const override
 
real_type norm_sqr () const
 
virtual real_type linfty_norm () const override
 
virtual Number add_and_dot (const Number a, const VectorSpaceVector< Number > &V, const VectorSpaceVector< Number > &W) override
 
virtual size_type size () const override
 
virtual ::IndexSet locally_owned_elements () const override
 
virtual void print (std::ostream &out, const unsigned int precision=3, const bool scientific=true, const bool across=true) const override
 
virtual std::size_t memory_consumption () const override
 
static ::ExceptionBaseExcVectorTypeNotCompatible ()
 
static ::ExceptionBaseExcIteratorRangeDoesNotMatchVectorSize ()
 

Subscriptor functionality

Classes derived from Subscriptor provide a facility to subscribe to this object. This is mostly used by the SmartPointer class.

void subscribe (std::atomic< bool > *const validity, const std::string &identifier="") const
 
void unsubscribe (std::atomic< bool > *const validity, const std::string &identifier="") const
 
unsigned int n_subscriptions () const
 
template<typename StreamType >
void list_subscribers (StreamType &stream) const
 
void list_subscribers () const
 
template<class Archive >
void serialize (Archive &ar, const unsigned int version)
 
static ::ExceptionBaseExcInUse (int arg1, std::string arg2, std::string arg3)
 
static ::ExceptionBaseExcNoSubscriber (std::string arg1, std::string arg2)
 
using map_value_type = decltype(counter_map)::value_type
 
using map_iterator = decltype(counter_map)::iterator
 
std::atomic< unsigned intcounter
 
std::map< std::string, unsigned intcounter_map
 
std::vector< std::atomic< bool > * > validity_pointers
 
const std::type_info * object_info
 
static std::mutex mutex
 
void check_no_subscribers () const noexcept
 

Detailed Description

template<typename Number>
class LinearAlgebra::distributed::BlockVector< Number >

An implementation of block vectors based on distributed deal.II vectors. While the base class provides for most of the interface, this class handles the actual allocation of vectors and provides functions that are specific to the underlying vector type.

Note
Instantiations for this template are provided for <float> and <double>; others can be generated in application programs (see the section on Template instantiations in the manual).
See also
Block (linear algebra)

Definition at line 84 of file la_parallel_block_vector.h.

Member Function Documentation

◆ collect_sizes()

void BlockVectorBase< Vector< Number > >::collect_sizes ( )
inherited

Update internal structures after resizing vectors. Whenever you reinited a block of a block vector, the internal data structures are corrupted. Therefore, you should call this function after all blocks got their new size.

◆ block() [1/2]

BlockType & BlockVectorBase< Vector< Number > >::block ( const unsigned int  i)
inherited

Access to a single block.

◆ block() [2/2]

const BlockType & BlockVectorBase< Vector< Number > >::block ( const unsigned int  i) const
inherited

Read-only access to a single block.

◆ get_block_indices()

const BlockIndices & BlockVectorBase< Vector< Number > >::get_block_indices ( ) const
inherited

Return a reference on the object that describes the mapping between block and global indices. The use of this function is highly deprecated and it should vanish in one of the next versions

◆ n_blocks()

unsigned int BlockVectorBase< Vector< Number > >::n_blocks ( ) const
inherited

Number of blocks.

◆ locally_owned_size()

std::size_t BlockVectorBase< Vector< Number > >::locally_owned_size ( ) const
inherited

Return local dimension of the vector. This is the sum of the local dimensions (i.e., values stored on the current processor) of all components.

◆ begin() [1/2]

iterator BlockVectorBase< Vector< Number > >::begin ( )
inherited

Return an iterator pointing to the first element.

◆ begin() [2/2]

const_iterator BlockVectorBase< Vector< Number > >::begin ( ) const
inherited

Return an iterator pointing to the first element of a constant block vector.

◆ end() [1/2]

iterator BlockVectorBase< Vector< Number > >::end ( )
inherited

Return an iterator pointing to the element past the end.

◆ end() [2/2]

const_iterator BlockVectorBase< Vector< Number > >::end ( ) const
inherited

Return an iterator pointing to the element past the end of a constant block vector.

◆ operator()() [1/2]

value_type BlockVectorBase< Vector< Number > >::operator() ( const size_type  i) const
inherited

Access components, returns U(i).

◆ operator()() [2/2]

reference BlockVectorBase< Vector< Number > >::operator() ( const size_type  i)
inherited

Access components, returns U(i) as a writeable reference.

◆ operator[]() [1/2]

value_type BlockVectorBase< Vector< Number > >::operator[] ( const size_type  i) const
inherited

Access components, returns U(i).

Exactly the same as operator().

◆ operator[]() [2/2]

reference BlockVectorBase< Vector< Number > >::operator[] ( const size_type  i)
inherited

Access components, returns U(i) as a writeable reference.

Exactly the same as operator().

◆ extract_subvector_to() [1/2]

void BlockVectorBase< Vector< Number > >::extract_subvector_to ( const std::vector< size_type > &  indices,
std::vector< OtherNumber > &  values 
) const
inherited

Instead of getting individual elements of a vector via operator(), this function allows getting a whole set of elements at once. The indices of the elements to be read are stated in the first argument, the corresponding values are returned in the second.

If the current vector is called v, then this function is the equivalent to the code

for (unsigned int i=0; i<indices.size(); ++i)
values[i] = v[indices[i]];
Precondition
The sizes of the indices and values arrays must be identical.

◆ extract_subvector_to() [2/2]

void BlockVectorBase< Vector< Number > >::extract_subvector_to ( ForwardIterator  indices_begin,
const ForwardIterator  indices_end,
OutputIterator  values_begin 
) const
inherited

Instead of getting individual elements of a vector via operator(), this function allows getting a whole set of elements at once. In contrast to the previous function, this function obtains the indices of the elements by dereferencing all elements of the iterator range provided by the first two arguments, and puts the vector values into memory locations obtained by dereferencing a range of iterators starting at the location pointed to by the third argument.

If the current vector is called v, then this function is the equivalent to the code

ForwardIterator indices_p = indices_begin;
OutputIterator values_p = values_begin;
while (indices_p != indices_end)
{
*values_p = v[*indices_p];
++indices_p;
++values_p;
}
Precondition
It must be possible to write into as many memory locations starting at values_begin as there are iterators between indices_begin and indices_end.

◆ operator==()

bool BlockVectorBase< Vector< Number > >::operator== ( const BlockVectorBase< VectorType2 > &  v) const
inherited

Check for equality of two block vector types. This operation is only allowed if the two vectors already have the same block structure.

◆ operator*()

value_type BlockVectorBase< Vector< Number > >::operator* ( const BlockVectorBase< Vector< Number > > &  V) const
inherited

\(U = U * V\): scalar product.

◆ add_and_dot()

value_type BlockVectorBase< Vector< Number > >::add_and_dot ( const value_type  a,
const BlockVectorBase< Vector< Number > > &  V,
const BlockVectorBase< Vector< Number > > &  W 
)
inherited

Performs a combined operation of a vector addition and a subsequent inner product, returning the value of the inner product. In other words, the result of this function is the same as if the user called

this->add(a, V);
return_value = *this * W;
void add(const std::vector< size_type > &indices, const ::Vector< OtherNumber > &values)
static const char V

The reason this function exists is that this operation involves less memory transfer than calling the two functions separately on deal.II's vector classes (Vector<Number> and LinearAlgebra::distributed::Vector<double>). This method only needs to load three vectors, this, V, W, whereas calling separate methods means to load the calling vector this twice. Since most vector operations are memory transfer limited, this reduces the time by 25% (or 50% if W equals this).

For complex-valued vectors, the scalar product in the second step is implemented as \(\left<v,w\right>=\sum_i v_i \bar{w_i}\).

◆ in_local_range()

bool BlockVectorBase< Vector< Number > >::in_local_range ( const size_type  global_index) const
inherited

Return true if the given global index is in the local range of this processor. Asks the corresponding block.

◆ is_non_negative()

bool BlockVectorBase< Vector< Number > >::is_non_negative ( ) const
inherited

Return true if the vector has no negative entries, i.e. all entries are zero or positive. This function is used, for example, to check whether refinement indicators are really all positive (or zero).

◆ operator+=()

BlockVectorBase & BlockVectorBase< Vector< Number > >::operator+= ( const BlockVectorBase< Vector< Number > > &  V)
inherited

Addition operator. Fast equivalent to U.add(1, V).

◆ operator-=()

BlockVectorBase & BlockVectorBase< Vector< Number > >::operator-= ( const BlockVectorBase< Vector< Number > > &  V)
inherited

Subtraction operator. Fast equivalent to U.add(-1, V).

◆ add() [1/5]

void BlockVectorBase< Vector< Number > >::add ( const std::vector< size_type > &  indices,
const Vector< Number > &  values 
)
inherited

This is a second collective add operation. As a difference, this function takes a deal.II vector of values.

◆ add() [2/5]

void BlockVectorBase< Vector< Number > >::add ( const size_type  n_elements,
const size_type indices,
const Number *  values 
)
inherited

Take an address where n_elements are stored contiguously and add them into the vector. Handles all cases which are not covered by the other two add() functions above.

◆ add() [3/5]

void BlockVectorBase< Vector< Number > >::add ( const value_type  s)
inherited

\(U(0-DIM)+=s\). Addition of s to all components. Note that s is a scalar and not a vector.

◆ add() [4/5]

void BlockVectorBase< Vector< Number > >::add ( const value_type  a,
const BlockVectorBase< Vector< Number > > &  V 
)
inherited

U+=a*V. Simple addition of a scaled vector.

◆ add() [5/5]

void BlockVectorBase< Vector< Number > >::add ( const value_type  a,
const BlockVectorBase< Vector< Number > > &  V,
const value_type  b,
const BlockVectorBase< Vector< Number > > &  W 
)
inherited

U+=a*V+b*W. Multiple addition of scaled vectors.

◆ sadd() [1/4]

void BlockVectorBase< Vector< Number > >::sadd ( const value_type  s,
const BlockVectorBase< Vector< Number > > &  V 
)
inherited

U=s*U+V. Scaling and simple vector addition.

◆ sadd() [2/4]

void BlockVectorBase< Vector< Number > >::sadd ( const value_type  s,
const value_type  a,
const BlockVectorBase< Vector< Number > > &  V 
)
inherited

U=s*U+a*V. Scaling and simple addition.

◆ sadd() [3/4]

void BlockVectorBase< Vector< Number > >::sadd ( const value_type  s,
const value_type  a,
const BlockVectorBase< Vector< Number > > &  V,
const value_type  b,
const BlockVectorBase< Vector< Number > > &  W 
)
inherited

U=s*U+a*V+b*W. Scaling and multiple addition.

◆ sadd() [4/4]

void BlockVectorBase< Vector< Number > >::sadd ( const value_type  s,
const value_type  a,
const BlockVectorBase< Vector< Number > > &  V,
const value_type  b,
const BlockVectorBase< Vector< Number > > &  W,
const value_type  c,
const BlockVectorBase< Vector< Number > > &  X 
)
inherited

U=s*U+a*V+b*W+c*X. Scaling and multiple addition.

◆ operator*=()

BlockVectorBase & BlockVectorBase< Vector< Number > >::operator*= ( const value_type  factor)
inherited

Scale each element of the vector by a constant value.

◆ operator/=()

BlockVectorBase & BlockVectorBase< Vector< Number > >::operator/= ( const value_type  factor)
inherited

Scale each element of the vector by the inverse of the given value.

◆ scale()

void BlockVectorBase< Vector< Number > >::scale ( const BlockVector2 &  v)
inherited

Multiply each element of this vector by the corresponding element of v.

◆ equ()

void BlockVectorBase< Vector< Number > >::equ ( const value_type  a,
const BlockVector2 &  V 
)
inherited

U=a*V. Assignment.

Member Data Documentation

◆ components

std::vector<Vector< Number > > BlockVectorBase< Vector< Number > >::components
protectedinherited

Pointer to the array of components.

Definition at line 950 of file block_vector_base.h.

◆ block_indices

BlockIndices BlockVectorBase< Vector< Number > >::block_indices
protectedinherited

Object managing the transformation between global indices and indices within the different blocks.

Definition at line 956 of file block_vector_base.h.


The documentation for this class was generated from the following file: